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PLoS One. 2012;7(7):e41983.

Association of polymorphism in pri-microRNAs-371-372-373 with the occurrence of hepatocellular carcinoma in hepatitis B virus infected patients.

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제1저자 곽민선 · 교신저자 김윤준

소속 (1)
  1. Department of Internal Medicine and Liver Research Institute, Seoul National University College of Medicine, Seoul, Republic of Korea.

Abstract

BACKGROUND Micro RNAs-371-372-373 (miRNAs-371-373), originating from the same pri-miRNA transcript, are reported to be upregulated in hepatocellular carcinoma (HCC) and to be related to the regulation of hepatitis B virus (HBV) infection. Our study investigated whether pri-miRNAs-371-373 polymorphisms are associated with the risk of HCC occurrence and HBV clearance.

METHODS Genetic variations were identified through direct DNA sequencing using TaqMan assay. Three sequence variants of pri-miRNAs-371-373 were identified. Genetic associations of those with HCC occurrence and HBV clearance among patients with HBV infection were analyzed using logistic regression analyses with adjustment for age and gender (n = 1439).

RESULTS For the occurrence of HCC, polymorphism rs3859501C>A acted as a protective factor both in chronic carriers (OR = 0.75, P = 0.005 in a codominant model; OR = 0.71, P = 0.02 in a dominant model; OR = 0.66, P = 0.03 in recessive model) and liver cirrhosis patients (OR = 0.69, P = 0.001 in a codominant model; OR = 0.60, P = 0.003 in a dominant model; OR = 0.63, P = 0.03 in a recessive model). The pri-miRNAs-371-373_ht2 [C-A-C] also showed a protective effect on HCC occurrence both in the chronic carrier and liver cirrhosis groups (P<0.05 in both). However, there was no significant association between pri-miRNAs-371-373 polymorphisms and HBV clearance.

CONCLUSIONS In conclusion, among chronic carriers and liver cirrhosis patients, the A allele of rs3859501 and the haplotype pri-miRNAs-371-373_ht2 were more protective to HCC than other genotypes and haplotypes. Further studies into the roles of rs3859501 and pri-miRNAs-371-373_ht2 haplotype in hepatocarcinogenesis are needed.

Figures

Figure 1
Figure 1 Physical map, haplotypes, and linkage disequilibrium of rs28461391, rs3859501, rs12983273. (a) Schematic gene map and single nucleotide polymorphisms in the pri-miRNA region of miRNA-371-372-373 on chromosome 19q13.42. Black blocks represent miRNA-371, -372, and -373, respectively. The frequency in parentheses was based on the genotyping data (n = 1,439). (b) Haplotypes of rs28461391, rs3859501, rs12983273. (c) Linkage disequilibrium among the three single nucleotide polymorphisms. The upper right-hand and lower left-hand triangles depict the absolute value of standardized disequilibrium coefficient |D′| and the correlation coefficient r 2.

그림 출처: PubMed Central 공개 논문 (PMC3407047)

Conflict of interest statement

Competing Interests:The authors have declared that no competing interests exist.

그 밖의 정보
출판 형태
Journal Article, Research Support, Non-U.S. Gov't
저널
PloS one · eISSN 1932-6203
전자 출판
2012-07-27
MeSH
Adult · Aged · Aged, 80 and over · Carcinoma, Hepatocellular / genetics / pathology / virology · Female · Gene Frequency · Genetic Predisposition to Disease / genetics · Haplotypes / genetics · Hepatitis B virus / metabolism / pathogenicity · Humans · Liver Neoplasms / genetics / pathology / virology · Male · MicroRNAs / genetics · Middle Aged · Polymorphism, Single Nucleotide* · Young Adult
Substances
MIRN371 microRNA, human · MIRN372 microRNA, human · MIRN373 microRNA, human · MicroRNAs
참고문헌
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